Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101168438Chloride intracellular channel 5a. (518 aa)    
Predicted Functional Partners:
LOC101169215
Phostensin domain-containing protein.
   
 0.613
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.548
clic2
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
   
 
 0.542
ripor3
RIPOR family member 3.
     
 0.420
ripor2
RHO family interacting cell polarization regulator 2.
     
 0.420
twf1
Twinfilin actin-binding protein 1a.
     
 0.402
atp8a2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
  
 0.400
atp8a1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
  
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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