Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155057Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family. (365 aa)    
Predicted Functional Partners:
CCR8
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
0.909
LOC101161792
SCY domain-containing protein.
     
  0.900
LOC101164090
Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.
     
 
0.900
eif2b1
Eukaryotic translation initiation factor 2B, subunit 1 alpha; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
 
 0.520
LOC101156910
Matrix metallopeptidase 20a (enamelysin).
     
 0.499
LOC101161479
Interleukin 12 receptor, beta 2a.
      
 0.441
LOC101162072
Prostaglandin E receptor 4 (subtype EP4) c; Belongs to the G-protein coupled receptor 1 family.
  
   
 0.424
LOC101156669
Matrix metallopeptidase 13b.
     
 0.423
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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