STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173734Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (473 aa)    
Predicted Functional Partners:
GOLGA7
Golgin A7.
    
 0.525
golga7b
Golgin A7 family member B.
    
 0.525
LOC111947425
Golgin A7.
    
 0.525
LOC101168845
Erf4 domain-containing protein.
    
 0.525
pot1
Protection of telomeres 1 homolog.
    
 0.513
ENSORLP00000035938
Uncharacterized protein.
    
 0.486
tmem86a
Transmembrane protein 86A.
      
 0.476
dlst
Dihydrolipoamide S-succinyltransferase.
    
 
 0.448
hras
HRas proto-oncogene, GTPase a.
    
 0.424
LOC101154954
Zgc:55558.
    
 0.424
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.