Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101173734Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (473 aa)    
Predicted Functional Partners:
GOLGA7
Golgin A7.
   
 0.665
golga7b
Golgin A7 family member B.
   
 0.665
LOC111947425
Golgin A7.
   
 0.665
LOC101168845
Erf4 domain-containing protein.
   
 0.665
tmem86a
Transmembrane protein 86A.
      
 0.535
hras
HRas proto-oncogene, GTPase a.
    
 0.504
LOC101154954
Zgc:55558.
    
 0.504
kras
GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation.
    
 0.504
CSDE1
Cold shock domain containing E1, RNA-binding.
    
 0.504
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
   
 
 0.502
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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