Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173072Uncharacterized protein. (928 aa)    
Predicted Functional Partners:
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
      
 0.746
pank4
Pantothenate kinase.
    
 
 0.731
LOC101172288
Amyloid beta (A4) precursor protein b.
    
 0.702
APP
Amyloid beta precursor protein.
    
 0.702
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.669
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.656
fam83d
Family with sequence similarity 83 member D.
   
 
 0.630
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
 0.625
GPR139
G protein-coupled receptor 139.
     
 0.585
cenpf
Centromere protein F.
   
 
 0.563
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.