STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
enpp4Ectonucleotide pyrophosphatase/phosphodiesterase 4. (551 aa)    
Predicted Functional Partners:
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
     
 0.690
LOC101161201
Galectin.
    
 0.671
LOC101159552
Galectin.
    
 0.671
trmt1l
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.609
ak6
Adenylate kinase isoenzyme 6; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. May have a role in nuclear energy homeostasis. Has also ATPase activity. May be involved in regulation of Cajal body (CB) formation; Belongs to the adenylate kinase family. AK6 subfamily.
      
 0.600
rars2
Arginyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.564
pigf
Phosphatidylinositol glycan anchor biosynthesis, class F.
    
 0.562
H2MT00_ORYLA
PWI domain-containing protein.
      
 0.550
inpp5d
Inositol polyphosphate-5-phosphatase D.
   
  
 0.506
parp12
Poly (ADP-ribose) polymerase family, member 12a.
      
 0.498
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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