Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFAP36Cilia and flagella associated protein 36. (447 aa)    
Predicted Functional Partners:
LOC101160749
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.867
arl3
ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.867
zcchc17
Zinc finger, CCHC domain containing 17.
      
 0.746
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
      
 0.745
LOC101159275
ADP ribosylation factor like GTPase 3, like 2; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.738
ccdc103
Dynein_attach_N domain-containing protein.
      
 0.716
cnot10
CCR4-NOT transcription complex, subunit 10.
      
 0.713
mks1
MKS transition zone complex subunit 1.
      
 0.597
LOC101164761
Rhophilin associated tail protein 1-like.
      
 0.586
ribc1
RIB43A domain with coiled-coils 1.
      
 0.585
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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