Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atm | ENSORLP00000027619 | ENSORLP00000026266 | ENSORLP00000027619 | Uncharacterized protein. | TAN domain-containing protein. | 0.929 |
Atm | bard1 | ENSORLP00000026266 | ENSORLP00000020088 | Uncharacterized protein. | BRCA1 associated RING domain 1. | 0.880 |
Atm | chek2 | ENSORLP00000026266 | ENSORLP00000032936 | Uncharacterized protein. | Checkpoint kinase 2. | 0.993 |
Atm | mdm2 | ENSORLP00000026266 | ENSORLP00000034706 | Uncharacterized protein. | MDM2 proto-oncogene. | 0.847 |
Atm | mdm4 | ENSORLP00000026266 | ENSORLP00000035882 | Uncharacterized protein. | MDM4 regulator of p53; Belongs to the MDM2/MDM4 family. | 0.777 |
Atm | rps27a | ENSORLP00000026266 | ENSORLP00000038189 | Uncharacterized protein. | Ribosomal protein S27a. | 0.596 |
Atm | tp53 | ENSORLP00000026266 | ENSORLP00000008031 | Uncharacterized protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.996 |
Atm | tp53bp1 | ENSORLP00000026266 | ENSORLP00000033455 | Uncharacterized protein. | Tumor protein p53 binding protein, 1. | 0.944 |
Atm | tp73 | ENSORLP00000026266 | ENSORLP00000005521 | Uncharacterized protein. | Tumor protein p73; Participates in the apoptotic response to DNA damage. Isoforms containing the transactivation domain are pro-apoptotic, isoforms lacking the domain are anti-apoptotic and block the function of p53 and transactivating p73 isoforms. May be a tumor suppressor protein. | 0.768 |
ENSORLP00000027619 | Atm | ENSORLP00000027619 | ENSORLP00000026266 | TAN domain-containing protein. | Uncharacterized protein. | 0.929 |
ENSORLP00000027619 | bard1 | ENSORLP00000027619 | ENSORLP00000020088 | TAN domain-containing protein. | BRCA1 associated RING domain 1. | 0.880 |
ENSORLP00000027619 | chek2 | ENSORLP00000027619 | ENSORLP00000032936 | TAN domain-containing protein. | Checkpoint kinase 2. | 0.938 |
ENSORLP00000027619 | mdm2 | ENSORLP00000027619 | ENSORLP00000034706 | TAN domain-containing protein. | MDM2 proto-oncogene. | 0.847 |
ENSORLP00000027619 | mdm4 | ENSORLP00000027619 | ENSORLP00000035882 | TAN domain-containing protein. | MDM4 regulator of p53; Belongs to the MDM2/MDM4 family. | 0.777 |
ENSORLP00000027619 | rps27a | ENSORLP00000027619 | ENSORLP00000038189 | TAN domain-containing protein. | Ribosomal protein S27a. | 0.596 |
ENSORLP00000027619 | tp53 | ENSORLP00000027619 | ENSORLP00000008031 | TAN domain-containing protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.956 |
ENSORLP00000027619 | tp53bp1 | ENSORLP00000027619 | ENSORLP00000033455 | TAN domain-containing protein. | Tumor protein p53 binding protein, 1. | 0.944 |
ENSORLP00000027619 | tp73 | ENSORLP00000027619 | ENSORLP00000005521 | TAN domain-containing protein. | Tumor protein p73; Participates in the apoptotic response to DNA damage. Isoforms containing the transactivation domain are pro-apoptotic, isoforms lacking the domain are anti-apoptotic and block the function of p53 and transactivating p73 isoforms. May be a tumor suppressor protein. | 0.768 |
bard1 | Atm | ENSORLP00000020088 | ENSORLP00000026266 | BRCA1 associated RING domain 1. | Uncharacterized protein. | 0.880 |
bard1 | ENSORLP00000027619 | ENSORLP00000020088 | ENSORLP00000027619 | BRCA1 associated RING domain 1. | TAN domain-containing protein. | 0.880 |
page 1 of 5