STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlcd1TLC domain containing 1. (258 aa)    
Predicted Functional Partners:
dhrs7b
Dehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.803
Rimbp2
RIMS binding protein 2.
      
 0.668
LOC101160164
Dehydrogenase/reductase (SDR family) member 7Ca.
    
 
 0.666
dhrs11
Dehydrogenase/reductase (SDR family) member 11a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.646
cbr1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.627
traf4
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
      
 0.610
LOC101175234
Si:dkey-12e7.4; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.601
LOC101167433
Zgc:158868.
      
 0.601
LOC101158176
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.601
LOC101175020
Zgc:65997; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.590
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.