STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gckrUncharacterized protein. (559 aa)    
Predicted Functional Partners:
amdhd2
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
    
 0.951
gck
Phosphotransferase.
   
 0.861
HK1
Hexokinase 1.
   
 0.844
LOC101164634
Hexokinase domain containing 1.
   
 0.844
LOC101156878
Hexokinase 1.
   
 0.844
LOC101166309
Hexokinase 2.
   
 0.844
LOC101165960
Phosphotransferase.
   
 0.819
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.722
LOC101163376
PPC domain-containing protein.
     
 0.645
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
      
 0.636
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.