STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gckrUncharacterized protein. (559 aa)    
Predicted Functional Partners:
gck
Phosphotransferase.
   
 0.903
HK1
Hexokinase 1.
   
 0.885
LOC101164634
Hexokinase domain containing 1.
   
 0.885
LOC101156878
Hexokinase 1.
   
 0.885
LOC101166309
Hexokinase 2.
   
 0.885
amdhd2
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
    
 0.864
LOC101165960
Phosphotransferase.
   
 0.827
NUP54
Nucleoporin 54.
     
 0.748
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
     
 0.737
khk
Ketohexokinase.
   
  
 0.710
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.