Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101167034B cell receptor associated protein 29. (275 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.763
VAPB
VAMP associated protein B and C.
   
 0.714
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
   
 0.714
LOC101174096
VAMP (vesicle-associated membrane protein)-associated protein B and C.
   
 0.714
LOC100125536
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.687
casp8
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.687
mospd1
Motile sperm domain containing 1.
   
 0.615
pgrmc1
Progestin receptor membrane component 1; Belongs to the cytochrome b5 family.
   
 0.595
phb
Prohibitin.
   
   0.492
pgrmc2
Progestin receptor membrane component 2; Belongs to the cytochrome b5 family.
   
 0.480
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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