STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nek8NIMA-related kinase 8. (712 aa)    
Predicted Functional Partners:
nphp3
Nephronophthisis 3.
      
 0.830
invs
Inversin.
   
 0.813
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
   
 0.767
H2LG67_ORYLA
Uncharacterized protein.
    
 
 0.686
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
 0.673
pkd1
Uncharacterized protein.
      
 0.628
nek6
NIMA-related kinase 6; Belongs to the protein kinase superfamily.
  
 
0.598
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
    
0.584
nphp4
Uncharacterized protein.
   
 
 0.565
nphp1
Nephronophthisis 1.
      
 0.558
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.