STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
preplProlyl endopeptidase like. (718 aa)    
Predicted Functional Partners:
plekhj1
Pleckstrin homology domain containing, family J member 1.
      
 0.702
slc3a1
Solute carrier family 3 member 1.
  
  
 0.676
camkmt
Calmodulin-lysine N-methyltransferase.
      
 0.663
spire2
Spire-type actin nucleation factor 2.
      
 0.590
fancf
FA complementation group F.
      
 0.589
sf3a2
Splicing factor 3a, subunit 2.
      
 0.589
alg14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.558
cuedc2
CUE domain containing 2.
      
 0.558
surf2
Surfeit 2.
      
 0.558
LOC101158177
Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.514
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.