STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
preplProlyl endopeptidase like. (718 aa)    
Predicted Functional Partners:
slc3a1
Solute carrier family 3 member 1.
  
  
 0.901
camkmt
Calmodulin-lysine N-methyltransferase.
      
 0.884
eda
Ectodysplasin A; Belongs to the tumor necrosis factor family.
      
 0.759
alg14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.716
surf2
Surfeit 2.
      
 0.716
dpagt1
Uncharacterized protein.
      
 0.716
cuedc2
CUE domain containing 2.
      
 0.707
plekhj1
Pleckstrin homology domain containing, family J member 1.
      
 0.693
LOC101164943
Synaptotagmin XV.
      
 0.619
LOC101170101
Glutamine--fructose-6-phosphate transaminase 1.
   
  
 0.610
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.