STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169670Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (446 aa)    
Predicted Functional Partners:
STEAP3
STEAP family member 3, metalloreductase.
      
 0.602
ghrh
Growth hormone releasing hormone.
    
 0.552
vip
Vasoactive intestinal peptide.
    
 0.552
ADCYAP1
Adenylate cyclase activating polypeptide 1a.
    
 0.547
LOC101165591
Adenylate cyclase activating polypeptide 1b.
    
 0.547
LOC101156047
Uncharacterized protein.
    
 0.523
LOC101166988
CRF domain-containing protein.
    
 0.520
crh
Corticotropin-releasing hormone.
    
 0.520
ucn
Urotensin 1.
    
 0.520
ankrd10
Ankyrin repeat domain 10b.
      
 0.504
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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