STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tprg1lTumor protein p63 regulated 1-like. (281 aa)    
Predicted Functional Partners:
LOC101163660
RRM domain-containing protein.
   
 0.827
LOC100049528
Serine and arginine rich splicing factor 2a.
   
 0.827
rbm8a
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.814
gpr153
G protein-coupled receptor 153.
    
 0.756
eif4a3
Eukaryotic translation initiation factor 4A3.
   
 0.752
LOC101162697
Serine and arginine rich splicing factor 1a.
   
 0.744
LOC101171767
Uncharacterized protein.
   
 0.744
LOC101164733
Serine and arginine rich splicing factor 9.
   
 0.744
ddx51
DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.
   
 0.730
LOC101167611
Mago homolog, exon junction complex subunit.
   
 0.711
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.