fmnl1 protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

fmnl1

Formin-like 1a. (1110 aa)

Predicted Functional Partners:

dusp27

0.815

klhl38

0.813

sntb2

0.813

CDC42

0.760

LOC101164400

0.760

nphp4

0.743

LOC101164658

0.654

LOC101174454

0.654

col9a1

0.588

vps13a

0.569

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	fmnl1	ENSORLP00000015084	ENSORLP00000005641	Cell division cycle 42.	Formin-like 1a.	0.760
LOC101164400	fmnl1	ENSORLP00000034529	ENSORLP00000005641	Uncharacterized protein.	Formin-like 1a.	0.760
LOC101164658	fmnl1	ENSORLP00000007959	ENSORLP00000005641	Uncharacterized protein.	Formin-like 1a.	0.654
LOC101174454	fmnl1	ENSORLP00000028896	ENSORLP00000005641	Uncharacterized protein.	Formin-like 1a.	0.654
col9a1	dusp27	ENSORLP00000013074	ENSORLP00000038529	Collagen, type IX, alpha 1b.	Dual specificity phosphatase 27; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.618
col9a1	fmnl1	ENSORLP00000013074	ENSORLP00000005641	Collagen, type IX, alpha 1b.	Formin-like 1a.	0.588
col9a1	klhl38	ENSORLP00000013074	ENSORLP00000015501	Collagen, type IX, alpha 1b.	Kelch-like family member 38a.	0.590
dusp27	col9a1	ENSORLP00000038529	ENSORLP00000013074	Dual specificity phosphatase 27; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Collagen, type IX, alpha 1b.	0.618
dusp27	fmnl1	ENSORLP00000038529	ENSORLP00000005641	Dual specificity phosphatase 27; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Formin-like 1a.	0.815
dusp27	klhl38	ENSORLP00000038529	ENSORLP00000015501	Dual specificity phosphatase 27; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Kelch-like family member 38a.	0.845
fmnl1	CDC42	ENSORLP00000005641	ENSORLP00000015084	Formin-like 1a.	Cell division cycle 42.	0.760
fmnl1	LOC101164400	ENSORLP00000005641	ENSORLP00000034529	Formin-like 1a.	Uncharacterized protein.	0.760
fmnl1	LOC101164658	ENSORLP00000005641	ENSORLP00000007959	Formin-like 1a.	Uncharacterized protein.	0.654
fmnl1	LOC101174454	ENSORLP00000005641	ENSORLP00000028896	Formin-like 1a.	Uncharacterized protein.	0.654
fmnl1	col9a1	ENSORLP00000005641	ENSORLP00000013074	Formin-like 1a.	Collagen, type IX, alpha 1b.	0.588
fmnl1	dusp27	ENSORLP00000005641	ENSORLP00000038529	Formin-like 1a.	Dual specificity phosphatase 27; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.815
fmnl1	klhl38	ENSORLP00000005641	ENSORLP00000015501	Formin-like 1a.	Kelch-like family member 38a.	0.813
fmnl1	nphp4	ENSORLP00000005641	ENSORLP00000045422	Formin-like 1a.	Uncharacterized protein.	0.743
fmnl1	sntb2	ENSORLP00000005641	ENSORLP00000042474	Formin-like 1a.	Syntrophin, beta 2.	0.813
fmnl1	vps13a	ENSORLP00000005641	ENSORLP00000007188	Formin-like 1a.	Vacuolar protein sorting 13 homolog A.	0.569