STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znhit2Zinc finger, HIT-type containing 2. (568 aa)    
Predicted Functional Partners:
aar2
AAR2 splicing factor.
    
 
 0.738
ENSORLP00000036349
Uncharacterized protein.
   
 
 0.703
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.699
nup98
Nucleoporin 98.
      
 0.669
ckap5
Cytoskeleton associated protein 5.
    
   0.662
ecd
Ecdysoneless homolog (Drosophila).
    
 
 0.613
pfdn6
Prefoldin subunit 6.
   
  
 0.565
KIF18A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.559
SLITRK1
SLIT and NTRK like family member 1.
   
  
 0.558
znhit3
Zinc finger, HIT-type containing 3.
      
 0.558
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.