STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEBP2AE binding protein 2. (465 aa)    
Predicted Functional Partners:
jarid2
Jumonji, AT rich interactive domain 2b.
    
 0.991
eed
Embryonic ectoderm development protein.
    
 0.985
suz12
SUZ12 polycomb repressive complex 2 subunit b.
    
 0.971
ezh2
Uncharacterized protein.
   
 0.970
rbbp4
Retinoblastoma binding protein 4.
   
 0.966
LOC101158611
VEFS-Box domain-containing protein.
    
 0.950
ezh1
Uncharacterized protein.
   
 0.942
LOC101156710
Retinoblastoma binding protein 4, like.
   
 0.935
rps27a
Ribosomal protein S27a.
    
  0.726
pcgf6
Polycomb group ring finger 6.
    
 0.655
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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