STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsd11b1lHydroxysteroid (11-beta) dehydrogenase 1-like a. (262 aa)    
Predicted Functional Partners:
LOC105353580
Stearoyl-CoA desaturase b; Belongs to the fatty acid desaturase type 1 family.
    
 
 0.628
STEAP3
STEAP family member 3, metalloreductase.
      
 0.562
klf9
Kruppel-like factor 9.
    
 
 0.539
LOC101166958
Kruppel-like factor 13.
    
 
 0.538
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.525
ocln
Occludin b.
   
 
 0.498
fdx2
Ferredoxin 2.
   
 0.488
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.488
mcat
Malonyl CoA:ACP acyltransferase (mitochondrial).
  
 
 0.460
LOC101170577
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
      
 0.456
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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