STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LI65_ORYLAUncharacterized protein. (264 aa)    
Predicted Functional Partners:
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.917
pcyt2
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.917
LOC101162151
Phosphate cytidylyltransferase 1, choline, beta b.
     
 0.912
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta a.
     
 0.912
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha a.
     
 0.912
LOC101159912
Choline kinase beta.
     
 0.911
LOC101161031
Choline kinase alpha.
     
 0.911
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
   
 
 0.908
H2LD81_ORYLA
Phosphatase, orphan 1.
  
  
 
0.902
CHAT
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
     
 0.901
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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