STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlx6Distal-less homeobox 6a. (246 aa)    
Predicted Functional Partners:
dlx5
Distal-less homeobox 5a.
  
 
0.843
bmp4
Bone morphogenetic protein 4.
     
 0.520
ednra
Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.
      
 0.512
edn1
Endothelin 1.
      
 0.504
hand2
Heart and neural crest derivatives expressed 2.
      
 0.490
hopx
Homeobox domain-containing protein.
      
 0.464
LOC101168740
Mohawk homeobox b.
    
 
 0.458
bmp2
TGF_BETA_2 domain-containing protein.
     
 0.401
LOC101163346
Bone morphogenetic protein 16.
     
 0.401
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.