STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nkpd1NTPase, KAP family P-loop domain containing 1. (686 aa)    
Predicted Functional Partners:
magi2
Membrane associated guanylate kinase, WW and PDZ domain containing 2a.
    
   0.549
LOC101173221
Membrane associated guanylate kinase, WW and PDZ domain containing 2b.
    
   0.549
crk
CRK proto-oncogene, adaptor protein.
    
 0.536
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.536
LOC110016423
Uncharacterized protein.
    
 0.536
ift81
Intraflagellar transport 81 homolog.
    
 0.496
LOC101167529
RAP1A, member of RAS oncogene family b.
    
 0.460
LOC101172864
Uncharacterized protein.
    
 0.460
LOC101171247
RAP1A, member of RAS oncogene family a.
    
 0.460
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.458
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.