STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HRH1Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins. (544 aa)    
Predicted Functional Partners:
LOC101168718
Uncharacterized protein.
    
 0.822
LOC101168962
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.822
LOC101161353
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.822
LOC101157684
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
 0.772
LOC101167719
Uncharacterized protein.
    
 0.764
LOC101173805
Glutamate receptor, metabotropic 5a.
   
 
 0.631
grm5
Glutamate receptor, metabotropic 5b.
   
 
 0.626
LOC101163507
Glutamate receptor, ionotropic, AMPA 4a.
      
 0.605
CHRNA1-2
Cholinergic receptor nicotinic alpha 1 subunit.
      
 0.597
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
      
 0.592
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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