wac protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

wac

WW domain containing adaptor with coiled-coil a. (544 aa)

Predicted Functional Partners:

rnf40

0.874

rnf20

0.874

H2M255_ORYLA

0.844

LOC101165683

0.844

ENSORLP00000045060

0.844

u2af2

0.763

sf3b3

0.763

sf3b2

0.753

cdc5l

0.738

snrnp35

0.734

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000045060	H2M255_ORYLA	ENSORLP00000045060	ENSORLP00000012494	RRM domain-containing protein.	RNA binding motif protein 25a.	0.900
ENSORLP00000045060	sf3b2	ENSORLP00000045060	ENSORLP00000010339	RRM domain-containing protein.	Splicing factor 3b, subunit 2.	0.614
ENSORLP00000045060	sf3b3	ENSORLP00000045060	ENSORLP00000044032	RRM domain-containing protein.	Splicing factor 3b, subunit 3.	0.774
ENSORLP00000045060	snrnp35	ENSORLP00000045060	ENSORLP00000007132	RRM domain-containing protein.	Small nuclear ribonucleoprotein 35 (U11/U12).	0.770
ENSORLP00000045060	u2af2	ENSORLP00000045060	ENSORLP00000014464	RRM domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.813
ENSORLP00000045060	wac	ENSORLP00000045060	ENSORLP00000005728	RRM domain-containing protein.	WW domain containing adaptor with coiled-coil a.	0.844
H2M255_ORYLA	ENSORLP00000045060	ENSORLP00000012494	ENSORLP00000045060	RNA binding motif protein 25a.	RRM domain-containing protein.	0.900
H2M255_ORYLA	LOC101165683	ENSORLP00000012494	ENSORLP00000014878	RNA binding motif protein 25a.	RNA binding motif protein 25b.	0.900
H2M255_ORYLA	sf3b2	ENSORLP00000012494	ENSORLP00000010339	RNA binding motif protein 25a.	Splicing factor 3b, subunit 2.	0.614
H2M255_ORYLA	sf3b3	ENSORLP00000012494	ENSORLP00000044032	RNA binding motif protein 25a.	Splicing factor 3b, subunit 3.	0.774
H2M255_ORYLA	snrnp35	ENSORLP00000012494	ENSORLP00000007132	RNA binding motif protein 25a.	Small nuclear ribonucleoprotein 35 (U11/U12).	0.770
H2M255_ORYLA	u2af2	ENSORLP00000012494	ENSORLP00000014464	RNA binding motif protein 25a.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.813
H2M255_ORYLA	wac	ENSORLP00000012494	ENSORLP00000005728	RNA binding motif protein 25a.	WW domain containing adaptor with coiled-coil a.	0.844
LOC101165683	H2M255_ORYLA	ENSORLP00000014878	ENSORLP00000012494	RNA binding motif protein 25b.	RNA binding motif protein 25a.	0.900
LOC101165683	sf3b2	ENSORLP00000014878	ENSORLP00000010339	RNA binding motif protein 25b.	Splicing factor 3b, subunit 2.	0.614
LOC101165683	sf3b3	ENSORLP00000014878	ENSORLP00000044032	RNA binding motif protein 25b.	Splicing factor 3b, subunit 3.	0.774
LOC101165683	snrnp35	ENSORLP00000014878	ENSORLP00000007132	RNA binding motif protein 25b.	Small nuclear ribonucleoprotein 35 (U11/U12).	0.770
LOC101165683	u2af2	ENSORLP00000014878	ENSORLP00000014464	RNA binding motif protein 25b.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.813
LOC101165683	wac	ENSORLP00000014878	ENSORLP00000005728	RNA binding motif protein 25b.	WW domain containing adaptor with coiled-coil a.	0.844
cdc5l	sf3b2	ENSORLP00000023227	ENSORLP00000010339	CDC5 cell division cycle 5-like (S. pombe).	Splicing factor 3b, subunit 2.	0.947