STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlx5Distal-less homeobox 5a. (296 aa)    
Predicted Functional Partners:
dlx2
Homeobox domain-containing protein.
   
 
 0.983
dlx6
Distal-less homeobox 6a.
  
 
0.881
myf6
Myogenic factor 6.
      
 0.778
bmp4
Bone morphogenetic protein 4.
     
 0.764
runx2
Runt-related transcription factor.
    
 0.755
fgf4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.743
bmp2
TGF_BETA_2 domain-containing protein.
     
 0.712
LOC101172514
Homeobox domain-containing protein.
   
 0.681
hand2
Heart and neural crest derivatives expressed 2.
    
 
 0.663
LOC101163346
Bone morphogenetic protein 16.
     
 0.653
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.