STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsd11b1l-211-beta-hydroxysteroid dehydrogenase type 3. (285 aa)    
Predicted Functional Partners:
hsd17b8
Hydroxysteroid (17-beta) dehydrogenase 8.
  
  
 0.951
LOC101165994
20beta-hydroxysteroid dehydrogenase type2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
0.945
LOC101163971
Hydroxysteroid (17-beta) dehydrogenase 12a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
0.943
cyp17a2
Cytochrome P450 family 17 polypeptide 2; Belongs to the cytochrome P450 family.
   
 
 0.934
cyp11b
Cytochrome P450 11beta; Belongs to the cytochrome P450 family.
   
 
 0.934
LOC101160884
Hydroxysteroid (17-beta) dehydrogenase 12b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
0.932
LOC100125474
Hydroxysteroid (11-beta) dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
0.925
hsd17b1
Hydroxysteroid (17-beta) dehydrogenase 1.
  
  
  0.924
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
     
 0.922
LOC101158433
Hydroxysteroid (17-beta) dehydrogenase 7.
     
 0.922
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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