STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpn2LRRCT domain-containing protein. (520 aa)    
Predicted Functional Partners:
LOC101172732
Glycoprotein IX (platelet).
   
 0.863
cpn1
Carboxypeptidase N, polypeptide 1.
   
 0.790
gp1bb
Glycoprotein Ib platelet subunit beta.
   
 0.757
LOC101155758
Uncharacterized protein.
  
   
 0.602
lrrc58
Leucine rich repeat containing 58b.
  
   
 0.570
LOC101170246
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 0.532
ENSORLP00000044935
Uncharacterized protein.
  
     0.509
LRRC10B
Leucine rich repeat containing 10B.
  
     0.502
LOC101161032
Si:zfos-323e3.4.
  
     0.501
LOC101162873
Leucine rich repeat containing 18b.
  
     0.500
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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