STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddx24DEAD (Asp-Glu-Ala-Asp) box helicase 24. (844 aa)    
Predicted Functional Partners:
rbm28
RNA binding motif protein 28.
   
 0.981
ddx18
RNA helicase.
  
 
0.976
wdr74
WD repeat domain 74.
   
 
 0.970
wdr12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.964
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
  
 
0.963
ddx52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
  
0.963
nop14
NOP14 nucleolar protein homolog (yeast).
   
 0.962
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.954
ebna1bp2
EBNA1 binding protein 2.
   
 0.952
pum3
Pumilio RNA-binding family member 3.
   
 
 0.949
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.