Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ddx24DEAD (Asp-Glu-Ala-Asp) box helicase 24. (844 aa)    
Predicted Functional Partners:
rbm28
RNA binding motif protein 28.
   
 0.988
wdr74
WD repeat domain 74.
   
 
 0.985
wdr12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.981
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.980
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.980
cebpz
CCAAT enhancer binding protein zeta.
   
 
 0.979
ddx54
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.
  
 
0.978
rbm34
RNA binding motif protein 34.
   
 0.977
ebna1bp2
EBNA1 binding protein 2.
   
 0.974
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
  
 
0.972
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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