Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101168781Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (266 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
   
  
 0.704
LOC101159188
Carboxypeptidase A4.
   
 
 0.558
LOC101163721
Carboxypeptidase A1.
   
 
 0.558
CPA1
Carboxypeptidase A1.
   
 
 0.558
LOC101172916
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
 0.555
LOC101164326
Ribonucleotide reductase M2 b.
      
 0.532
LOC101163011
Transcobalamin II.
   
 
 0.529
LOC101165512
Uncharacterized protein.
      
 0.527
lasp1
LIM and SH3 protein 1.
      
 0.527
amn
Amnion associated transmembrane protein.
      
 0.522
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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