Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LIE7_ORYLAUncharacterized protein. (1651 aa)    
Predicted Functional Partners:
LOC101171502
Uncharacterized protein.
    
 0.942
LOC101173369
Junction plakoglobin a.
    
 0.942
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.942
ENSORLP00000045894
Uncharacterized protein.
 
 
  0.937
ctnna1
Catenin (cadherin-associated protein), alpha 1.
   
 0.929
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.929
LOC101161503
Uncharacterized protein.
   
 0.929
celsr1
Cadherin EGF LAG seven-pass G-type receptor 1a; Belongs to the G-protein coupled receptor 2 family.
   
0.928
CDH20
Cadherin 20; Cadherins are calcium-dependent cell adhesion proteins.
   
0.917
cdhr5
Uncharacterized protein.
   
0.914
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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