Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ecpasEcm29 proteasome adaptor and scaffold. (1847 aa)    
Predicted Functional Partners:
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
 
 0.943
psmc6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
   
 
 0.940
psmc3
Proteasome 26S subunit ATPase 3; Belongs to the AAA ATPase family.
   
 
 0.936
usp14
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.928
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 
 0.927
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
   
 
 0.920
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
   
 
 0.919
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 
 0.917
psmd8
Proteasome 26S subunit, non-ATPase 8.
    
 
 0.911
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
 
 0.911
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.