becn1 protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

becn1

Beclin 1. (446 aa)

Predicted Functional Partners:

uvrag

0.999

atg14

0.999

pik3c3

0.999

pik3r4

0.999

ambra1

0.997

ulk1

0.996

LOC101167046

0.995

LOC101160680

0.995

nrbf2

0.994

LOC101165300

0.991

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101160680	LOC101167046	ENSORLP00000040680	ENSORLP00000017355	Unc-51 like autophagy activating kinase 2.	Unc-51 like autophagy activating kinase 1a.	0.908
LOC101160680	ambra1	ENSORLP00000040680	ENSORLP00000017710	Unc-51 like autophagy activating kinase 2.	Autophagy/beclin-1 regulator 1b.	0.965
LOC101160680	atg14	ENSORLP00000040680	ENSORLP00000033404	Unc-51 like autophagy activating kinase 2.	Autophagy related 14.	0.990
LOC101160680	becn1	ENSORLP00000040680	ENSORLP00000005780	Unc-51 like autophagy activating kinase 2.	Beclin 1.	0.995
LOC101160680	nrbf2	ENSORLP00000040680	ENSORLP00000018293	Unc-51 like autophagy activating kinase 2.	Nuclear receptor binding factor 2b.	0.716
LOC101160680	pik3c3	ENSORLP00000040680	ENSORLP00000034727	Unc-51 like autophagy activating kinase 2.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.954
LOC101160680	pik3r4	ENSORLP00000040680	ENSORLP00000044131	Unc-51 like autophagy activating kinase 2.	Phosphoinositide-3-kinase, regulatory subunit 4.	0.954
LOC101160680	ulk1	ENSORLP00000040680	ENSORLP00000013892	Unc-51 like autophagy activating kinase 2.	Unc-51 like autophagy activating kinase 1.	0.906
LOC101165300	becn1	ENSORLP00000038040	ENSORLP00000005780	Uncharacterized protein.	Beclin 1.	0.991
LOC101167046	LOC101160680	ENSORLP00000017355	ENSORLP00000040680	Unc-51 like autophagy activating kinase 1a.	Unc-51 like autophagy activating kinase 2.	0.908
LOC101167046	ambra1	ENSORLP00000017355	ENSORLP00000017710	Unc-51 like autophagy activating kinase 1a.	Autophagy/beclin-1 regulator 1b.	0.965
LOC101167046	atg14	ENSORLP00000017355	ENSORLP00000033404	Unc-51 like autophagy activating kinase 1a.	Autophagy related 14.	0.990
LOC101167046	becn1	ENSORLP00000017355	ENSORLP00000005780	Unc-51 like autophagy activating kinase 1a.	Beclin 1.	0.995
LOC101167046	nrbf2	ENSORLP00000017355	ENSORLP00000018293	Unc-51 like autophagy activating kinase 1a.	Nuclear receptor binding factor 2b.	0.716
LOC101167046	pik3c3	ENSORLP00000017355	ENSORLP00000034727	Unc-51 like autophagy activating kinase 1a.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.954
LOC101167046	pik3r4	ENSORLP00000017355	ENSORLP00000044131	Unc-51 like autophagy activating kinase 1a.	Phosphoinositide-3-kinase, regulatory subunit 4.	0.954
LOC101167046	ulk1	ENSORLP00000017355	ENSORLP00000013892	Unc-51 like autophagy activating kinase 1a.	Unc-51 like autophagy activating kinase 1.	0.903
ambra1	LOC101160680	ENSORLP00000017710	ENSORLP00000040680	Autophagy/beclin-1 regulator 1b.	Unc-51 like autophagy activating kinase 2.	0.965
ambra1	LOC101167046	ENSORLP00000017710	ENSORLP00000017355	Autophagy/beclin-1 regulator 1b.	Unc-51 like autophagy activating kinase 1a.	0.965
ambra1	atg14	ENSORLP00000017710	ENSORLP00000033404	Autophagy/beclin-1 regulator 1b.	Autophagy related 14.	0.942