STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celf5Cugbp, Elav-like family member 5a. (519 aa)    
Predicted Functional Partners:
LOC101159914
Si:ch211-13k12.2.
      
 0.664
LOC101155504
Uncharacterized protein.
      
 0.664
pias4
Protein inhibitor of activated STAT, 4a.
      
 0.594
rgl1
Ral guanine nucleotide dissociation stimulator-like 1.
      
 0.575
LOC101166672
Uncharacterized protein.
      
 0.569
LOC100820722
Transcription factor 3b.
      
 0.566
ell
Elongation factor RNA polymerase II.
      
 0.517
RXFP3
Relaxin family peptide receptor 3.
      
 0.517
ell2
Elongation factor, RNA polymerase II, 2.
      
 0.514
H2LGV0_ORYLA
ANK_REP_REGION domain-containing protein.
     
 0.463
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.