Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLITRK1SLIT and NTRK like family member 1. (693 aa)    
Predicted Functional Partners:
LOC101169564
Protein tyrosine phosphatase receptor type Sa.
    
 0.962
LOC101174175
Protein tyrosine phosphatase receptor type Sa.
    
 0.962
Kcnf1
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
   
 
 0.881
znhit2
Zinc finger, HIT-type containing 2.
      
 0.690
KIF18A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.690
ptprf
Protein tyrosine phosphatase receptor type Fa.
    
 0.641
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.641
LOC101168742
Protein tyrosine phosphatase receptor type Fb.
    
 0.641
PTPRD-2
Uncharacterized protein.
    
 0.641
immp2l
Inner mitochondrial membrane peptidase subunit 2.
      
 0.626
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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