Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC101171479cAMP responsive element binding protein 3-like 3a. (434 aa)    
Predicted Functional Partners:
LOC101166594
Ribosomal protein S6 kinase.
    
  0.901
mbtps2
Membrane-bound transcription factor peptidase, site 2.
    
 0.839
mbtps1
Membrane-bound transcription factor peptidase, site 1.
    
 0.837
LOC101160197
E1A binding protein p300 a.
    
  0.807
adcy9
CREB binding protein b.
    
  0.807
LOC101163392
CREB binding protein a.
    
  0.807
LOC101168870
E1A binding protein p300 b.
    
  0.807
crebrf
Creb3 regulatory factor.
    
 0.711
LOC101160964
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.650
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.650
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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