Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101154851Cullin 4A; Belongs to the cullin family. (612 aa)    
Predicted Functional Partners:
ddb1
Damage-specific DNA binding protein 1.
   
 0.995
ercc8
Excision repair cross-complementation group 8.
    
 0.995
crbn
Cereblon.
    
 0.995
trpc4ap
Transient receptor potential cation channel, subfamily C, member 4 associated protein a.
    
 0.975
dcaf11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
    
 0.973
LOC101156715
DDB1 and CUL4 associated factor 8.
   
 0.973
ddb2
Damage-specific DNA binding protein 2.
    
 0.970
H2MG95_ORYLA
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.968
dda1
DET1 and DDB1 associated 1.
    
 0.963
wdtc1
WD and tetratricopeptide repeats 1.
    
 0.959
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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