hmg20b protein (Oryzias latipes) - STRING interaction network

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Score

hmg20b

High mobility group 20B. (292 aa)

Predicted Functional Partners:

kdm1a

0.999

phf21a

0.999

hmg20a

0.979

brca2

0.960

sf3a2

0.934

rcor1

0.914

rcor3

0.908

rcor2

0.908

snai2

0.893

LOC101172913

0.810

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101172913	hmg20a	ENSORLP00000017757	ENSORLP00000039112	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	High mobility group 20A.	0.706
LOC101172913	hmg20b	ENSORLP00000017757	ENSORLP00000005838	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	High mobility group 20B.	0.810
LOC101172913	kdm1a	ENSORLP00000017757	ENSORLP00000015788	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family.	0.923
LOC101172913	phf21a	ENSORLP00000017757	ENSORLP00000017902	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	PHD finger protein 21Ab.	0.828
LOC101172913	rcor1	ENSORLP00000017757	ENSORLP00000024245	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	REST corepressor 1.	0.852
LOC101172913	rcor2	ENSORLP00000017757	ENSORLP00000007120	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	REST corepressor 2.	0.782
LOC101172913	rcor3	ENSORLP00000017757	ENSORLP00000001380	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	REST corepressor 3.	0.782
LOC101172913	snai2	ENSORLP00000017757	ENSORLP00000021850	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	Snail family zinc finger 2.	0.628
brca2	hmg20b	ENSORLP00000039367	ENSORLP00000005838	BRCA2 DNA repair associated.	High mobility group 20B.	0.960
hmg20a	LOC101172913	ENSORLP00000039112	ENSORLP00000017757	High mobility group 20A.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.706
hmg20a	hmg20b	ENSORLP00000039112	ENSORLP00000005838	High mobility group 20A.	High mobility group 20B.	0.979
hmg20a	kdm1a	ENSORLP00000039112	ENSORLP00000015788	High mobility group 20A.	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family.	0.989
hmg20a	phf21a	ENSORLP00000039112	ENSORLP00000017902	High mobility group 20A.	PHD finger protein 21Ab.	0.990
hmg20a	rcor1	ENSORLP00000039112	ENSORLP00000024245	High mobility group 20A.	REST corepressor 1.	0.865
hmg20a	rcor2	ENSORLP00000039112	ENSORLP00000007120	High mobility group 20A.	REST corepressor 2.	0.865
hmg20a	rcor3	ENSORLP00000039112	ENSORLP00000001380	High mobility group 20A.	REST corepressor 3.	0.865
hmg20a	snai2	ENSORLP00000039112	ENSORLP00000021850	High mobility group 20A.	Snail family zinc finger 2.	0.894
hmg20b	LOC101172913	ENSORLP00000005838	ENSORLP00000017757	High mobility group 20B.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.810
hmg20b	brca2	ENSORLP00000005838	ENSORLP00000039367	High mobility group 20B.	BRCA2 DNA repair associated.	0.960
hmg20b	hmg20a	ENSORLP00000005838	ENSORLP00000039112	High mobility group 20B.	High mobility group 20A.	0.979