STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcg5ATP-binding cassette, sub-family G (WHITE), member 5. (638 aa)    
Predicted Functional Partners:
abcg8
ATP-binding cassette, sub-family G (WHITE), member 8.
  
0.998
LOC101167488
ATP-binding cassette, sub-family G (WHITE), member 2a.
   
0.877
abcg1
ATP-binding cassette, sub-family G (WHITE), member 1.
   
0.842
LOC101170649
ATP-binding cassette, sub-family G (WHITE), member 2d.
   
0.816
LOC101161259
ATP-binding cassette, sub-family G (WHITE), member 4a.
   
0.816
LOC101164130
ATP-binding cassette, sub-family G (WHITE), member 2c.
   
0.816
LOC101164423
ABC transporter domain-containing protein.
   
0.816
abcc10
ATP-binding cassette, sub-family C (CFTR/MRP), member 10.
  
 0.663
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
   
 0.614
LOC101169721
Apolipoprotein A-Ib.
   
 0.565
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.