Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRTP1Growth hormone regulated TBC protein 1b. (351 aa)    
Predicted Functional Partners:
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.664
pcid2
PCI domain containing 2.
 
    
 0.639
Wdr90
WD_REPEATS_REGION domain-containing protein.
    
   0.610
ENSORLP00000042816
Uncharacterized protein.
    
   0.610
tmco3
Transmembrane and coiled-coil domains 3.
      
 0.603
rab20
RAB20, member RAS oncogene family.
    
 0.560
cfap126
Cilia and flagella associated protein 126.
   
   0.529
efhb
Uncharacterized protein.
   
   0.527
pacrg
PARK2 co-regulated.
   
   0.523
cfap77
Uncharacterized protein.
   
 
 0.522
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.