Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glod4Glyoxalase domain containing 4. (285 aa)    
Predicted Functional Partners:
esd
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.686
lrrc66
IG domain-containing protein.
      
 0.682
oxnad1
Oxidoreductase NAD-binding domain containing 1.
  
 
 0.652
wdr82
WD repeat domain 82.
    
   0.639
LOC101173843
WD_REPEATS_REGION domain-containing protein.
    
   0.639
ethe1
ETHE1 persulfide dioxygenase.
  
 0.636
park7
DJ-1.
  
  
 0.633
iyd
Iodotyrosine deiodinase.
  
  
 0.606
fam32a
Family with sequence similarity 32 member A.
      
 0.603
mccc2
Methylcrotonoyl-CoA carboxylase 2 (beta).
  
 
 0.593
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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