Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gk5Glycerol kinase 5; Belongs to the FGGY kinase family. (526 aa)    
Predicted Functional Partners:
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
 0.912
btaf1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.
   
 
 0.766
aqp9
Aquaporin 9b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.743
pm20d1
Peptidase M20 domain containing 1, tandem duplicate 2.
   
  
 0.740
mdn1
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.
   
 
 0.734
ASTN2
Astrotactin 2.
    
 0.727
ears2
Glutamyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.723
ATAD3A
ATPase family AAA domain containing 3A.
   
  
 0.715
abcf3
ATP-binding cassette, sub-family F (GCN20), member 3.
    
 
 0.693
noc4l
Nucleolar complex associated 4 homolog.
      
 0.686
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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