STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQCarboxypeptidase Q. (480 aa)    
Predicted Functional Partners:
mtfr1
Mitochondrial fission regulator 1.
     
 0.705
LOC101163579
Erythropoietin receptor.
    
 0.610
pm20d1
Peptidase M20 domain containing 1, tandem duplicate 2.
     
 0.568
crcp
Calcitonin gene-related peptide-receptor component protein.
      
 0.559
LOC101168028
BCL2 like 10.
   
  
 0.558
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
      
 0.558
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.510
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
     
 0.507
sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
     
 0.492
LOC101174444
Si:dkey-28o19.1.
     
 0.486
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.