Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
igf2bp3Insulin-like growth factor 2 mRNA binding protein 3. (609 aa)    
Predicted Functional Partners:
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
   
 
 0.740
stau2
Staufen double-stranded RNA binding protein 2.
   
 
 0.646
efcab7
EF-hand calcium binding domain 7.
    
 
 0.588
LOC101172398
ELAV-like protein; Belongs to the RRM elav family.
    
 
 0.587
LOC101170313
ELAV-like protein; Belongs to the RRM elav family.
    
 
 0.587
mkrn2
Makorin, ring finger protein, 2.
    
 
 0.578
MPZL3
Myelin protein zero like 3.
      
 0.549
lin28b
Lin-28 homolog B (C. elegans).
   
 
 0.549
ilf2
Interleukin enhancer binding factor 2.
    
 
 0.548
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
      
 0.538
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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