LOC101157486 protein (Oryzias latipes) - STRING interaction network

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Score

LOC101157486

Zgc:110269. (329 aa)

Predicted Functional Partners:

pcna

0.994

pold1

0.964

rad50

0.955

lig1

0.952

dna2

0.928

apex1

0.925

rad52

0.922

mre11

0.919

rfc3

0.916

pold2

0.913

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101157486	apex1	ENSORLP00000005946	ENSORLP00000015494	Zgc:110269.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.925
LOC101157486	dna2	ENSORLP00000005946	ENSORLP00000013109	Zgc:110269.	DNA replication helicase/nuclease 2.	0.928
LOC101157486	lig1	ENSORLP00000005946	ENSORLP00000003171	Zgc:110269.	DNA ligase.	0.952
LOC101157486	mre11	ENSORLP00000005946	ENSORLP00000009106	Zgc:110269.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.919
LOC101157486	pcna	ENSORLP00000005946	ENSORLP00000037447	Zgc:110269.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.994
LOC101157486	pold1	ENSORLP00000005946	ENSORLP00000014232	Zgc:110269.	DNA polymerase.	0.964
LOC101157486	pold2	ENSORLP00000005946	ENSORLP00000016022	Zgc:110269.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.913
LOC101157486	rad50	ENSORLP00000005946	ENSORLP00000037867	Zgc:110269.	RAD50 homolog, double strand break repair protein.	0.955
LOC101157486	rad52	ENSORLP00000005946	ENSORLP00000013189	Zgc:110269.	RAD52 homolog, DNA repair protein.	0.922
LOC101157486	rfc3	ENSORLP00000005946	ENSORLP00000004622	Zgc:110269.	Replication factor C (activator 1) 3.	0.916
apex1	LOC101157486	ENSORLP00000015494	ENSORLP00000005946	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Zgc:110269.	0.925
apex1	lig1	ENSORLP00000015494	ENSORLP00000003171	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	DNA ligase.	0.982
apex1	mre11	ENSORLP00000015494	ENSORLP00000009106	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.540
apex1	pcna	ENSORLP00000015494	ENSORLP00000037447	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.964
apex1	pold1	ENSORLP00000015494	ENSORLP00000014232	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	DNA polymerase.	0.956
apex1	pold2	ENSORLP00000015494	ENSORLP00000016022	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.639
apex1	rad52	ENSORLP00000015494	ENSORLP00000013189	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	RAD52 homolog, DNA repair protein.	0.488
apex1	rfc3	ENSORLP00000015494	ENSORLP00000004622	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Replication factor C (activator 1) 3.	0.717
dna2	LOC101157486	ENSORLP00000013109	ENSORLP00000005946	DNA replication helicase/nuclease 2.	Zgc:110269.	0.928
dna2	lig1	ENSORLP00000013109	ENSORLP00000003171	DNA replication helicase/nuclease 2.	DNA ligase.	0.797