STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLPTM1LCLPTM1 like. (479 aa)    
Predicted Functional Partners:
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
      
 0.725
enosf1
Enolase superfamily member 1.
      
 0.589
mpv17l
Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.589
arl14ep
ADP-ribosylation factor-like 14 effector protein.
      
 0.589
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
 
    
 0.587
slc6a2
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.586
mad2l1
HORMA domain-containing protein.
    
   0.567
mad1l1
Mitotic arrest deficient 1 like 1.
    
   0.561
aifm3
Apoptosis inducing factor mitochondria associated 3.
      
 0.526
ncln
Nicalin.
   
  
 0.476
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.