Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101173000Stomatin (EPB72)-like 3b. (270 aa)    
Predicted Functional Partners:
c1qbp
Complement component 1, q subcomponent binding protein.
   
 0.653
H2LBJ7_ORYLA
Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.583
asic4
Acid-sensing (proton-gated) ion channel family member 4a; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.583
asic1
Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.583
LOC101174951
Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.583
LOC101159102
Acid-sensing (proton-gated) ion channel 1a; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.583
asic2
Acid-sensing (proton-gated) ion channel 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.583
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
   
 
 0.552
aqp1
Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.540
tmem59
Transmembrane protein 59.
   
 0.535
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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