STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
unc13aUncharacterized protein. (1484 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.929
ENSORLP00000026521
Uncharacterized protein.
   
 0.929
ENSORLP00000034554
C2 domain-containing protein.
   
 0.929
H2L8K4_ORYLA
Regulating synaptic membrane exocytosis 1a.
   
 0.710
LOC101174515
Regulating synaptic membrane exocytosis 3.
   
 0.710
ENSORLP00000031636
C2 domain-containing protein.
   
 0.710
med26
TFIIS N-terminal domain-containing protein.
   
  
 0.663
LOC101170763
Transportin 2 (importin 3, karyopherin beta 2b).
   
  
 0.660
TNPO2
Transportin 2.
   
  
 0.660
TNPO2-2
Transportin 2.
   
  
 0.660
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.