STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnh8Potassium voltage-gated channel, subfamily H (eag-related), member 8. (1035 aa)    
Predicted Functional Partners:
fkbp14
Peptidylprolyl isomerase.
   
  
 0.833
LOC101157467
Peptidylprolyl isomerase.
   
  
 0.671
LOC101156677
Potassium channel, subfamily K, member 5b; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
    
 
 0.614
zic4
Zinc finger of the cerebellum 4.
   
  
 0.568
evx1
Even-skipped homeobox 1.
      
 0.567
LOC101170797
Phospholipid scramblase; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. Belongs to the phospholipid scramblase family.
      
 0.509
zic1
Zic family member 1 (odd-paired homolog, Drosophila).
   
  
 0.504
LOC101168472
Sodium/potassium-transporting ATPase subunit alpha.
      
 0.493
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.476
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.476
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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