STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDZ-2Uncharacterized protein. (1911 aa)    
Predicted Functional Partners:
mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
   
 0.984
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
   
 0.984
LOC101169307
Angiomotin.
    
 0.973
amotl2
Angiomotin like 2a.
   
 0.925
LOC101159857
Angiomotin like 2b.
   
 0.925
LOC101165845
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.
    
 
 0.672
LOC101157949
Immunoglobulin superfamily, member 9b.
    
 0.609
amigo1
Adhesion molecule with Ig-like domain 1.
    
 
 0.609
igsf9b
Immunoglobulin superfamily member 9B.
    
 0.609
LOC101168439
Par-6 family cell polarity regulator alpha.
    
 0.595
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.