Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nhlrc2NHL repeat containing 2. (720 aa)    
Predicted Functional Partners:
tm2d2
TM2 domain containing 2.
      
 0.884
tm2d3
TM2 domain containing 3.
      
 0.880
morn5
MORN repeat containing 5.
    
 
 0.824
cdadc1
Cytidine and dCMP deaminase domain containing 1.
      
 0.808
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.734
ccdc186
Si:ch211-225b10.4.
   
  
 0.718
Brk1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
     
 0.718
tm2d1
TM2 domain containing 1.
      
 0.712
ccdc25
Coiled-coil domain containing 25.
      
 0.700
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
     
 0.699
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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