Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
alas15-aminolevulinate synthase. (623 aa)    
Predicted Functional Partners:
alad
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.990
LOC100049501
5-aminolevulinate synthase.
  
  
 
0.941
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.929
sardh
Sarcosine dehydrogenase.
  
 
 0.926
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
 
 0.925
gatm
Glycine amidinotransferase (L-arginine:glycine amidinotransferase).
     
 0.922
shmt2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.917
shmt1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.917
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.917
LOC101170713
Threonine aldolase 1.
  
 
 0.916
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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